All functions

DBBMM-class

The DBBMM class

DBBMMBurstStack-class

The DBBMMBurstStack class

DBBMMStack-class

The DBBMMStack class

Move-class

The Move class

MoveBurst

MoveBurst class

MoveStack-class

The MoveStack class

MovebankLogin-class

The MovebankLogin class

.UD-class

The UD class

UDStack()

Creating UDStack objects

angle(<.MoveTrackSingle>) angle(<.MoveTrackStack>)

Headings of the segments of a movement track

as.data.frame(<Move>) as.data.frame(<MoveStack>) as.data.frame(<MoveBurst>) as.data.frame(<dBMvariance>) as.data.frame(<.unUsedRecords>) as.data.frame(<.unUsedRecordsStack>)

Returns a Data Frame

brownian.bridge.dyn()

Calculates a dynamic Brownian Bridge

brownian.motion.variance.dyn(<.MoveTrackSingle>,<numeric>,<numeric>,<numeric>)

Calculates the dynamic brownian motion variance

burst(<Move>,<factor>)

Bursting a track

burstId(<MoveBurst>) `burstId<-`(<.MoveTrackSingleBurst>,<factor>)

Returns or sets the burstId

citations(<.MoveGeneral>) `citations<-`(<.MoveGeneral>)

Extract the citation of a Move or MoveStack object

contour(<.UD>) contour(<.UDStack>)

Contour plot

coordinates(<Move>)

Extract the track coordinates from a Move or MoveStack object

corridor(<.MoveTrackSingle>) corridor(<.MoveTrackStack>)

Corridor behavior identification

dBGBvariance-class

The dynBGBvariance class

dBMvariance

The dBMvariance class

distance(<.MoveTrackSingle>,<missing>) distance(<.MoveTrackStack>,<missing>)

Distance between the locations of a movement track

duplicatedDataExample

Tracking data example with duplicated timestamps

dynBGB-class

The dynBGB class

dynBGB(<dBGBvariance>,<RasterLayer>,<numeric>) dynBGB(<.MoveTrackSingle>,<RasterLayer>,<numeric>) dynBGB(<.MoveTrackSingle>,<numeric>,<ANY>) dynBGB(<.MoveTrackSingle>,<missing>,<ANY>)

Calculation of the dynamic Bivariate Gausian Bridge

dynBGBvariance()

Calculates the Bivariate Gaussian Bridge motion variance

emd(<SpatialPoints>,<SpatialPoints>) emd(<RasterLayer>,<RasterLayer>)

Earth movers distance

equalProj(<list>)

Checks projections for being equal

fishers

A MoveStack

getDataRepositoryData()

Download data from the Movebank Data Repository

getDuplicatedTimestamps(<character>) getDuplicatedTimestamps(<factor>)

Identifies duplicated timestamps

getMotionVariance()

Extracts the estimated motion variance

getMovebank(<character>,<MovebankLogin>)

Download Data from Movebank

getMovebankAnimals()

Animals, tags and IDs in a Movebank study

getMovebankData(<numeric>,<character>,<MovebankLogin>) getMovebankData(<numeric>,<numeric>,<MovebankLogin>)

Download data from Movebank as a Move object

getMovebankID()

Movebank Study ID

getMovebankLocationData(<numeric>,<numeric>,<character>,<MovebankLogin>) getMovebankLocationData(<numeric>,<numeric>,<numeric>,<MovebankLogin>)

Download location data from Movebank as a table

getMovebankNonLocationData(<numeric>,<numeric>,<character>,<MovebankLogin>) getMovebankNonLocationData(<numeric>,<numeric>,<numeric>,<MovebankLogin>)

Download non-location data from Movebank

getMovebankReferenceTable()

Download all reference data of a Movebank study

getMovebankSensorsAttributes()

Available attributes of Movebank sensors

getMovebankSensors()

Information about Movebank sensors

getMovebankStudies()

All studies on Movebank

getMovebankStudy()

Returns information of a Movebank study

getVolumeUD(<.UD>)

Utilization distribution (UD)

hrBootstrap(<SpatialPoints>) hrBootstrap(<.MoveTrackStack>)

Calculates and plots the area of the Minimum Convex Polygon of a track

idData(<.MoveTrack>) `idData<-`(<.MoveTrack>,<missing>,<missing>,<data.frame>) `idData<-`(<.MoveTrack>,<ANY>,<ANY>,<ANY>)

Obtain or replace the idData slot of a Move object

interpolateTime()

Interpolate a trajectory

leroy

GPS track data from a fisher

leroydbgb

dynamic Bivariate Gausian Bridge example object

licenseTerms(<.MoveGeneral>) `licenseTerms<-`(<.MoveGeneral>)

Extract the license terms of a Move or MoveStack object

lines(<.MoveTrackSingle>) lines(<.MoveTrackStack>) lines(<.MoveTrackSingleBurst>)

Plotting the lines of a track

move-package

An overview of the functions in this package

move(<connection>,<missing>,<missing>,<missing>,<missing>) move(<ltraj>,<missing>,<missing>,<missing>,<missing>) move(<telemetry>,<missing>,<missing>,<missing>,<missing>) move(<track_xyt>,<missing>,<missing>,<missing>,<missing>) move(<list>,<missing>,<missing>,<missing>,<missing>) move(<track>,<missing>,<missing>,<missing>,<missing>) move(<binClstPath>,<missing>,<missing>,<missing>,<missing>) move(<binClstStck>,<missing>,<missing>,<missing>,<missing>) move(<data.frame>,<missing>,<missing>,<missing>,<missing>) move(<numeric>,<numeric>,<POSIXct>,<data.frame>,<CRS>)

Create a Move object

move2ade(<.MoveTrackSingle>) move2ade(<.MoveTrackStack>)

Convert a Move or MoveStack object to a SpatialPointsDataFrame

moveStack(<list>) moveStack(<Move>) moveStack(<MoveStack>)

Creating a MoveStack

movebankLogin(<character>,<character>)

Login into Movebank

n.indiv(<Move>) n.indiv(<.MoveTrackStack>)

Extract the number of individuals of a MoveStack

n.locs(<SpatialPointsDataFrame>) n.locs(<.MoveTrackStack>)

Extract the number of locations of a Move or MoveStack object

namesIndiv()

Extract the names of the individuals of a move or moveStack object

outerProbability(<RasterLayer>) outerProbability(<DBBMMStack>)

Calculates the probabilities at the edges of a raster

plot(<.MoveTrackSingle>,<missing>) plot(<.MoveTrackStack>,<missing>) plot(<.MoveTrackSingleBurst>,<missing>)

Plotting track or raster

plotBursts(<list>) plotBursts(<.MoveTrackSingleBurst>)

Plotting the centroids of a bursted track

points(<.MoveTrackSingle>) points(<.MoveTrackStack>) points(<.MoveTrackSingleBurst>)

Plotting the points of a track

raster(<DBBMM>) raster(<DBBMMStack>)

Extract raster topology from DBBMM or dynBGB

raster2contour(<.UD>) raster2contour(<.UDStack>)

Convert raster to contour lines

searchMovebankStudies()

Search for a study on Movebank

seglength(<SpatialPointsDataFrame>)

Segment lengths of a track

sensor(<.MoveTrack>) sensor(<.unUsedRecords>)

Extract the sensor of a Move unUsedRecords object

show(<Move>)

Show a Move, DBBMM, dynBGB object

spTransform(<Move>,<character>) spTransform(<Move>,<missing>)

Transform projection of movement track

speed(<.MoveTrackSingle>) speed(<.MoveTrackStack>)

Speed between the locations of a movement track

split(<MoveStack>,<missing>)

Splitting a MoveStack, MoveBurst or DBBMMStack

`[`(<MoveStack>,<ANY>,<ANY>) `[[`(<MoveStack>,<character>,<missing>)

Subset movement tracks

summary(<.UD>) summary(<.UDStack>)

Summary of Move, DBBMM, dynBGB objects

thinTrackTime() thinDistanceAlongTrack()

Thinning trajectories to a specific time interval or distance.

timeLag(<.MoveTrackSingle>) timeLag(<.MoveTrackStack>)

Time lags between the locations of a movement track

timestamps(<.MoveTrackSingle>) timestamps(<.MoveTrack>) `timestamps<-`(<.MoveTrack>)

Extract or set the timestamps of a Move or MoveStack object

trackId(<MoveStack>)

Returns trackId

turnAngleGc(<.MoveTrackSingle>)

Turning angles on great circle tracks

leroydbbmm

Dynamic brownian bridges

.unUsedRecords-class

The .unUsedRecords and .unUsedRecordsStack class

unUsedRecords(<.unUsedRecords>) unUsedRecords(<.unUsedRecordsStack>) `unUsedRecords<-`(<.MoveTrackSingle>,<logical>) `unUsedRecords<-`(<.MoveTrackStack>,<logical>)

Extracts or creates the unUsedRecords